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Villin-1

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VIL1
VIL1
Identifiers
AliasesVIL1, D2S1471, VIL, villin 1
External IDsOMIM: 193040; MGI: 98930; GeneCards: VIL1
Available structures
PDB Ortholog search: PDBe RCSB
List of PDB id codes
1UNC, 3FG7
RNA expression pattern
Bgee Human Mouse (ortholog)
Top expressed in
jejunal mucosa
mucosa of ileum
mucosa of transverse colon
rectum
duodenum
mucosa of sigmoid colon
buccal mucosa cell
gallbladder
secondary oocyte
islet of Langerhans Top expressed in
ileum
intestinal villus
epithelium of small intestine
Ileal epithelium
crypt of lieberkuhn of small intestine
colon
left colon
duodenum
jejunum
Paneth cell
More reference expression data
BioGPS n/a
Gene ontology
Molecular function lysophosphatidic acid binding
calcium ion binding
protein homodimerization activity
cysteine-type endopeptidase inhibitor activity involved in apoptotic process
actin filament binding
protein binding
identical protein binding
actin binding
phosphatidylinositol-4,5-bisphosphate binding
Cellular component cytoplasm
cell projection
filopodium
ruffle
plasma membrane
nucleoplasm
microvillus
filopodium tip
brush border
actin filament bundle
extracellular exosome
cytoskeleton
lamellipodium
Biological process negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
actin nucleation
positive regulation of lamellipodium morphogenesis
cytoplasmic actin-based contraction involved in cell motility
epithelial cell differentiation
epidermal growth factor receptor signaling pathway
response to bacterium
positive regulation of cell migration
cellular response to hepatocyte growth factor stimulus
actin filament depolymerization
actin filament severing
barbed-end actin filament capping
positive regulation of epithelial cell migration
regulation of lamellipodium morphogenesis
terminal web assembly
cellular response to epidermal growth factor stimulus
actin filament polymerization
regulation of wound healing
cytoskeleton organization
actin filament capping
regulation of cell shape
positive regulation of multicellular organism growth
intestinal D-glucose absorption
positive regulation of actin filament bundle assembly
regulation of microvillus length
regulation of actin nucleation
positive regulation of actin filament depolymerization
apoptotic process
positive regulation of protein localization to plasma membrane
protein-containing complex assembly
Sources:Amigo / QuickGO
Orthologs
Databases NCBI: entry; OMA: entry
Species Human Mouse
Entrez 7429 22349
Ensembl ENSG00000127831 ENSMUSG00000026175
UniProt P09327 Q62468
RefSeq (mRNA) NM_007127 NM_009509
RefSeq (protein) NP_009058 NP_033535
Location (UCSC) Chr 2: 218.42 – 218.45 Mb Chr 1: 74.45 – 74.47 Mb
PubMed search [1] [2]
Wikidata
View/Edit Human View/Edit Mouse
The helix bundle in the headpiece domain of chicken villin.
The helix bundle in the headpiece domain of chicken villin. Image: source and license

Villin-1 is a 92.5 kDa tissue-specific actin-binding protein associated with the actin core bundle of the brush border.[3] Villin-1 is encoded by the VIL1 gene. Villin-1 contains multiple gelsolin-like domains capped by a small (8.5 kDa) "headpiece" at the C-terminus consisting of a fast and independently folding three-helix bundle that is stabilized by hydrophobic interactions.[4] The headpiece domain is a commonly studied protein in molecular dynamics due to its small size and fast folding kinetics and short primary sequence.[5][6]

Expression#edit

Villin-1 is an actin binding protein expressed mainly in the brush border of the epithelium in vertebrates but sometimes it is ubiquitously expressed in protists and plants.[6] Villin is found localized in the microvilli of the brush border of the epithelium lining of the gut and renal tubules in vertebrates.[7]

Structure#edit

Villin-1 consists of seven domains: six homologous domains that form the N-terminal core and a seventh domain that forms the C-terminal headpiece (cap).[5] The core comprises approximately 150 amino acid residues organized into six repeated segments, while the C-terminal headpiece is an 87-residue hydrophobic region.[3] Villin contains three phosphatidylinositol 4,5-bisphosphate (PIP2) binding sites, one in the headpiece and two in the core domain.[7]

The C-terminal headpiece (HP67) is a compact, independently folded 70-amino-acid domain that contains the principal F-actin-binding site. Residues K38, E39, K65, K70–K73, G74, L75, and F76 surround a hydrophobic core and are believed to contribute to F-actin binding. Residues E39 and K70 form a buried salt bridge linking the N- and C-terminal regions of the headpiece, which appears to stabilize the conformation required for actin binding, as disruption of this interaction abolishes binding. Residue W64 forms a conserved hydrophobic cap that is characteristic of the villin family, beneath which lies a crown of alternating positively and negatively charged residues.[7]

The C-terminal subdomain of the headpiece, designated VHP35, is stabilized in part by a buried cluster of three phenylalanine residues. Its small size and high α-helical content promote rapid folding, a property that has been confirmed experimentally. The related Arabidopsis thaliana villin-4 C-terminal construct VHP76 exhibits increased affinity for F-actin at elevated Ca2+ concentrations, further supporting the conserved role of the headpiece in actin binding. Overall, the headpiece adopts a simple topology of three α-helices surrounding a tightly packed hydrophobic core.

Villin-1 also undergoes post-translational modification by tyrosine phosphorylation,[8] and can form dimers through a dimerization site located near the amino terminus of the protein.[9]

Function#edit

Villin-1 is believed to function in the bundling, nucleation, capping and severing of actin filaments.[3] In vertebrates, villin proteins help to support the microfilaments of the microvilli of the brush border. However, knockout mice appear to show ultra-structurally normal microvilli reminding us that the function of villin is not definitively known; it may play a role in cell plasticity through F-actin severing.[7] The six-repeat villin core is responsible for Ca2+ actin severing while the headpiece is responsible for actin crosslinking and bundling (Ca independent). Villin is postulated to be the controlling protein for Ca2+ induced actin severing in the brush border. Ca2+ inhibits proteolytic cleavage of the domains of the 6 N-terminal core which inhibits actin severing.[5] In normal mice raising Ca2+ levels induces the severing of actin by villin, whereas in villin knockout mice this activity does not occur in response to heightened Ca2+ levels.[10] In the presence of low concentrations of Ca2+ the villin headpiece functions to bundle actin filaments whereas in the presence of high Ca2+ concentrations the N-terminal caps and severs these filaments.[3] The association of PIP2 with villin inhibits the actin capping and severing action and increases actin binding at the headpiece region, possibly through structural changes in the protein. PIP2 increases actin bundling not only by decreasing the severing action of villin but also through dissociating capping proteins, releasing actin monomers from sequestering proteins and stimulating actin nucleation and cross linking.[5]

Degradation and regulation#edit

Currently, it is theorized the regulation of plant villins are caused by degradation via the binding protein auxin, which targets the headpiece domain (VHP).

Role in intestinal and liver disease#edit

Villin-1 acts as a critical determinant of intestinal epithelial survival and barrier integrity. While classically defined by its cytoskeletal function (actin binding, caping and severing), it also serves as an epithelial cell-specific anti-apoptotic protein.[11][12][13]

Inflammatory bowel disease (IBD)#edit

In IBD (conditions such as Crohn's disease and ulcerative colitis), villin-1 expression is downregulated in the inflamed gut mucosa. This reduction correlates with the loss of tight junction proteins and Notch-1 signaling, leading to increased intestinal permeability ("leaky gut") and heightened sensitivity to cytokine-induced apoptosis.[14][15][16]

Biomarker for gut barrier failure#edit

Serum villin-1 was identified as a novel, non-invasive biomarker for gut barrier damage in patients with acutely decompensated (AD) cirrhosis and acute-on-chronic liver failure (ACLF).[17] Serum villin-1 levels follow a gradient of severity, rising significantly in patients transitioning from stable decompensation to ACLF. High serum concentrations are independently associated with systemic inflammation and high 90-day mortality rates. Conversely, tissue biopsies from these patients show a depletion of Villin-1 in the duodenal mucosa, confirming an inverse relationship between tissue integrity and serum levels during severe disease states.[17]

See also#edit

References#edit

  1. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  2. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ a b c d Friederich E, Vancompernolle K, Louvard D, Vandekerckhove J (September 1999). "Villin function in the organization of the actin cytoskeleton. Correlation of in vivo effects to its biochemical activities in vitro". The Journal of Biological Chemistry. 274 (38): 26751–26760. doi:10.1074/jbc.274.38.26751. PMID 10480879.
  4. ^ Ghoshdastider U, Popp D, Burtnick LD, Robinson RC (November 2013). "The expanding superfamily of gelsolin homology domain proteins". Cytoskeleton. 70 (11). Hoboken, N.J.: 775–795. doi:10.1002/cm.21149. PMID 24155256. S2CID 205643538.
  5. ^ a b c d Bazari WL, Matsudaira P, Wallek M, Smeal T, Jakes R, Ahmed Y (July 1988). "Villin sequence and peptide map identify six homologous domains". Proceedings of the National Academy of Sciences of the United States of America. 85 (14): 4986–4990. Bibcode:1988PNAS...85.4986B. doi:10.1073/pnas.85.14.4986. PMC 281672. PMID 2839826.
  6. ^ a b Klahre U, Friederich E, Kost B, Louvard D, Chua NH (January 2000). "Villin-like actin-binding proteins are expressed ubiquitously in Arabidopsis". Plant Physiology. 122 (1): 35–48. Bibcode:2000PlanP.122...35K. doi:10.1104/pp.122.1.35. PMC 58842. PMID 10631247.
  7. ^ a b c d Meng J, Vardar D, Wang Y, Guo HC, Head JF, McKnight CJ (September 2005). "High-resolution crystal structures of villin headpiece and mutants with reduced F-actin binding activity". Biochemistry. 44 (36): 11963–11973. doi:10.1021/bi050850x. PMID 16142894.
  8. ^ Panebra A, Ma SX, Zhai LW, Wang XT, Rhee SG, Khurana S (September 2001). "Regulation of phospholipase C-gamma(1) by the actin-regulatory protein villin". American Journal of Physiology. Cell Physiology. 281 (3): C1046–58. doi:10.1152/ajpcell.2001.281.3.C1046. PMID 11502583. S2CID 12089989.
  9. ^ George SP, Wang Y, Mathew S, Srinivasan K, Khurana S (September 2007). "Dimerization and actin-bundling properties of villin and its role in the assembly of epithelial cell brush borders". The Journal of Biological Chemistry. 282 (36): 26528–26541. doi:10.1074/jbc.M703617200. PMID 17606613.
  10. ^ Revenu C, Courtois M, Michelot A, Sykes C, Louvard D, Robine S (2007). "Villin severing activity enhances actin-based motility in vivo". Molecular Biology of the Cell. 18 (3): 827–838. doi:10.1091/mbc.E06-05-0423. PMC 1805090. PMID 17182858.
  11. ^ Friederich E, Vancompernolle K, Louvard D, Vandekerckhove J (September 1999). "Villin Function in the Organization of the Actin Cytoskeleton". Journal of Biological Chemistry. 274 (38): 26751–26760. doi:10.1074/jbc.274.38.26751.
  12. ^ Wang Y, Srinivasan K, Siddiqui MR, George SP, Tomar A, Khurana S (April 2008). "A novel role for villin in intestinal epithelial cell survival and homeostasis". The Journal of Biological Chemistry. 283 (14): 9454–9464. doi:10.1074/jbc.M707962200. PMID 18198174.
  13. ^ Wang Y, George SP, Roy S, Pham E, Esmaeilniakooshkghazi A, Khurana S (October 2016). "Both the anti- and pro-apoptotic functions of villin regulate cell turnover and intestinal homeostasis". Scientific Reports. 6 (1) 35491. Bibcode:2016NatSR...635491W. doi:10.1038/srep35491. PMC 5073230. PMID 27765954.
  14. ^ Roy S, Esmaeilniakooshkghazi A, Patnaik S, Wang Y, George SP, Ahrorov A, et al. (April 2018). "Villin-1 and Gelsolin Regulate Changes in Actin Dynamics That Affect Cell Survival Signaling Pathways and Intestinal Inflammation". Gastroenterology. 154 (5): 1405–1420.e2. doi:10.1053/j.gastro.2017.12.016. PMC 7808315. PMID 29274870.
  15. ^ Banerjee S, Oneda B, Yap LM, Jewell DP, Matters GL, Fitzpatrick LR, et al. (May 2009). "MEP1A allele for meprin A metalloprotease is a susceptibility gene for inflammatory bowel disease". Mucosal Immunology. 2 (3): 220–231. doi:10.1038/mi.2009.3. PMC 2670347. PMID 19262505.
  16. ^ Dahan S, Rabinowitz KM, Martin AP, Berin MC, Unkeless JC, Mayer L (February 2011). "Notch-1 signaling regulates intestinal epithelial barrier function, through interaction with CD4+ T cells, in mice and humans". Gastroenterology. 140 (2): 550–559. doi:10.1053/j.gastro.2010.10.057. PMC 3031772. PMID 21056041.
  17. ^ a b Tornai D, Balogh B, Csillag A, Budai A, Kiss A, Antal-Szalmas P, et al. (April 2026). "Serum Villin-1-A Novel Marker of Gut Barrier Damage in Acutely Decompensated Cirrhosis: A Cohort Study and Validation". Alimentary Pharmacology & Therapeutics. 63 (7) apt.70481. doi:10.1111/apt.70481. hdl:1887/4295442. PMC 12982645. PMID 41340228.

Further reading#edit

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